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LMAN2L lectin, mannose binding 2 like [ Apteryx rowi (Okarito brown kiwi) ]

Gene ID: 112975328, updated on 19-Jun-2024

Summary

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Gene symbol
LMAN2L
Gene description
lectin, mannose binding 2 like
See related
Ensembl:ENSARWG00000017983
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx rowi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human mouse all
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Genomic context

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See LMAN2L in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current aptRow1 (GCF_003343035.1) Unplaced Scaffold NW_020450941.1 (281201..289748)

NW_020450941.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain 39 Neighboring gene cyclin and CBS domain divalent metal cation transport mediator 4 Neighboring gene fer-1 like family member 5 Neighboring gene KAT8 regulatory NSL complex subunit 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020450941 Unplaced Scaffold Reference aptRow1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
VIP36-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apteryx rowi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aptRow1

Genomic

  1. NW_020450941.1 Reference aptRow1

    Range
    281201..289748
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026085249.1 → XP_025941034.1  VIP36-like protein isoform X1

    Conserved Domains (1) summary
    cl14058
    Location:1 → 237
    lectin_L-type; legume lectins

  2. XM_026085250.1 → XP_025941035.1  VIP36-like protein isoform X2

    Related
    ENSARWP00000026615.1, ENSARWT00000030096.1
    Conserved Domains (1) summary
    cl14058
    Location:1 → 199
    lectin_L-type; legume lectins

  3. XM_026085251.1 → XP_025941036.1  VIP36-like protein isoform X3

    Related
    ENSARWP00000026618.1, ENSARWT00000030099.1
    Conserved Domains (1) summary
    cl14058
    Location:1 → 188
    lectin_L-type; legume lectins
Nucleotide Protein
Heading Accession and Version

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