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DGKD diacylglycerol kinase delta [ Apteryx rowi (Okarito brown kiwi) ]

Gene ID: 112972876, updated on 18-Sep-2024

Summary

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Gene symbol
DGKD
Gene description
diacylglycerol kinase delta
See related
Ensembl:ENSARWG00000002581
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx rowi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human mouse all
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Genomic context

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See DGKD in Genome Data Viewer
Location:
chromosome: Un
Exon count:
33
Annotation release Status Assembly Chr Location
100 current aptRow1 (GCF_003343035.1) Unplaced Scaffold NW_020450772.1 (3340744..3417058, complement)

NW_020450772.1Genomic Context describing neighboring genes Neighboring gene coagulation factor IX-like Neighboring gene vitamin K-dependent protein C-like Neighboring gene S-antigen visual arrestin Neighboring gene small Cajal body-specific RNA 6 Neighboring gene small Cajal body-specific RNA 6 Neighboring gene autophagy related 16 like 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020450772 Unplaced Scaffold Reference aptRow1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP-dependent diacylglycerol kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein homodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in diacylglycerol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
diacylglycerol kinase delta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apteryx rowi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aptRow1

Genomic

  1. NW_020450772.1 Reference aptRow1

    Range
    3340744..3417058 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026080015.1 → XP_025935800.1  diacylglycerol kinase delta isoform X3

    Related
    ENSARWP00000004000.1, ENSARWT00000004635.1
    Conserved Domains (6) summary
    cd09575
    Location:1087 → 1151
    SAM_DGK-delta; SAM domain of diacylglycerol kinase delta
    smart00109
    Location:178 → 228
    C1; Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)
    smart00045
    Location:709 → 866
    DAGKa; Diacylglycerol kinase accessory domain (presumed)
    smart00046
    Location:265 → 387
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    cd00029
    Location:106 → 155
    C1; Protein kinase C conserved region 1 (C1) . Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second ...
    cd13274
    Location:1 → 93
    PH_DGK_type2; Type 2 Diacylglycerol kinase Pleckstrin homology (PH) domain

  2. XM_026080013.1 → XP_025935798.1  diacylglycerol kinase delta isoform X1

    Conserved Domains (6) summary
    cd09575
    Location:1030 → 1094
    SAM_DGK-delta; SAM domain of diacylglycerol kinase delta
    smart00109
    Location:121 → 171
    C1; Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)
    smart00045
    Location:652 → 809
    DAGKa; Diacylglycerol kinase accessory domain (presumed)
    smart00046
    Location:208 → 330
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    cd00029
    Location:49 → 98
    C1; Protein kinase C conserved region 1 (C1) . Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second ...
    cl17171
    Location:2 → 36
    PH-like; Pleckstrin homology-like domain

  3. XM_026080014.1 → XP_025935799.1  diacylglycerol kinase delta isoform X2

    Conserved Domains (6) summary
    cd09575
    Location:1012 → 1076
    SAM_DGK-delta; SAM domain of diacylglycerol kinase delta
    smart00109
    Location:103 → 153
    C1; Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)
    smart00045
    Location:634 → 791
    DAGKa; Diacylglycerol kinase accessory domain (presumed)
    smart00046
    Location:190 → 312
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    cd00029
    Location:31 → 80
    C1; Protein kinase C conserved region 1 (C1) . Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second ...
    cl17171
    Location:1 → 18
    PH-like; Pleckstrin homology-like domain
Nucleotide Protein
Heading Accession and Version

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