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MTM1 myotubularin 1 [ Apteryx rowi (Okarito brown kiwi) ]

Gene ID: 112972760, updated on 15-Mar-2024

Summary

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Gene symbol
MTM1
Gene description
myotubularin 1
See related
Ensembl:ENSARWG00000013420
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx rowi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human mouse all
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Genomic context

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See MTM1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current aptRow1 (GCF_003343035.1) Unplaced Scaffold NW_020447364.1 (1687777..1731280)

NW_020447364.1Genomic Context describing neighboring genes Neighboring gene protein CXorf40A-like Neighboring gene heat shock transcription factor, Y-linked-like Neighboring gene mastermind like domain containing 1 Neighboring gene myotubularin related protein 1 Neighboring gene CD99 molecule like 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020447364 Unplaced Scaffold Reference aptRow1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrion distribution IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in muscle cell cellular homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myotubularin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apteryx rowi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aptRow1

Genomic

  1. NW_020447364.1 Reference aptRow1

    Range
    1687777..1731280
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026079771.1 → XP_025935556.1  myotubularin isoform X2

    Conserved Domains (2) summary
    cd13355
    Location:44 → 143
    PH-GRAM_MTM1; Myotubularian 1 protein (MTM1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam06602
    Location:166 → 487
    Myotub-related; Myotubularin-like phosphatase domain

  2. XM_026079753.1 → XP_025935538.1  myotubularin isoform X1

    Related
    ENSARWP00000019593.1, ENSARWT00000022228.1
    Conserved Domains (2) summary
    cd13355
    Location:44 → 143
    PH-GRAM_MTM1; Myotubularian 1 protein (MTM1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam06602
    Location:166 → 487
    Myotub-related; Myotubularin-like phosphatase domain

  3. XM_026079763.1 → XP_025935548.1  myotubularin isoform X1

    Conserved Domains (2) summary
    cd13355
    Location:44 → 143
    PH-GRAM_MTM1; Myotubularian 1 protein (MTM1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam06602
    Location:166 → 487
    Myotub-related; Myotubularin-like phosphatase domain
Nucleotide Protein
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