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LY75 lymphocyte antigen 75 [ Apteryx rowi (Okarito brown kiwi) ]

Gene ID: 112972008, updated on 15-Mar-2024

Summary

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Gene symbol
LY75
Gene description
lymphocyte antigen 75
See related
Ensembl:ENSARWG00000014996
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx rowi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human mouse all
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Genomic context

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See LY75 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
34
Annotation release Status Assembly Chr Location
100 current aptRow1 (GCF_003343035.1) Unplaced Scaffold NW_020450727.1 (1120313..1168182)

NW_020450727.1Genomic Context describing neighboring genes Neighboring gene integrin subunit beta 6 Neighboring gene phospholipase A2 receptor 1 Neighboring gene unconventional myosin-X-like Neighboring gene solute carrier family 4 member 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020450727 Unplaced Scaffold Reference aptRow1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lymphocyte antigen 75

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apteryx rowi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aptRow1

Genomic

  1. NW_020450727.1 Reference aptRow1

    Range
    1120313..1168182
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026077998.1 → XP_025933783.1  lymphocyte antigen 75 isoform X4

    Conserved Domains (3) summary
    smart00059
    Location:66 → 114
    FN2; Fibronectin type 2 domain
    cd00037
    Location:1022 → 1129
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    smart00034
    Location:121 → 246
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)

  2. XM_026077994.1 → XP_025933779.1  lymphocyte antigen 75 isoform X1

    Related
    ENSARWP00000022079.1, ENSARWT00000025022.1
    Conserved Domains (3) summary
    smart00059
    Location:66 → 114
    FN2; Fibronectin type 2 domain
    cd00037
    Location:1023 → 1130
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    smart00034
    Location:122 → 247
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)

  3. XM_026077995.1 → XP_025933780.1  lymphocyte antigen 75 isoform X2

    Conserved Domains (3) summary
    smart00059
    Location:66 → 114
    FN2; Fibronectin type 2 domain
    cd00037
    Location:1023 → 1130
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    smart00034
    Location:122 → 247
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)

  4. XM_026077997.1 → XP_025933782.1  lymphocyte antigen 75 isoform X3

    Conserved Domains (3) summary
    smart00059
    Location:66 → 114
    FN2; Fibronectin type 2 domain
    cd00037
    Location:1022 → 1129
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    smart00034
    Location:121 → 246
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
Nucleotide Protein
Heading Accession and Version

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