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CLGN calmegin [ Apteryx rowi (Okarito brown kiwi) ]

Gene ID: 112970242, updated on 15-Mar-2024

Summary

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Gene symbol
CLGN
Gene description
calmegin
See related
Ensembl:ENSARWG00000011267
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx rowi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human mouse all
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Genomic context

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See CLGN in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current aptRow1 (GCF_003343035.1) Unplaced Scaffold NW_020450407.1 (378766..414074, complement)

NW_020450407.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112970250 Neighboring gene uncharacterized LOC112970253 Neighboring gene microsomal glutathione S-transferase 2 Neighboring gene mastermind like transcriptional coactivator 3 Neighboring gene short coiled-coil protein Neighboring gene MGAT4 family member D Neighboring gene ELMO domain containing 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020450407 Unplaced Scaffold Reference aptRow1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calmegin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apteryx rowi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aptRow1

Genomic

  1. NW_020450407.1 Reference aptRow1

    Range
    378766..414074 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026074412.1 → XP_025930197.1  calmegin isoform X1

    Related
    ENSARWP00000016367.1, ENSARWT00000018640.1
    Conserved Domains (1) summary
    pfam00262
    Location:71 → 439
    Calreticulin; Calreticulin family

  2. XM_026074413.1 → XP_025930198.1  calmegin isoform X2

    Conserved Domains (1) summary
    pfam00262
    Location:71 → 439
    Calreticulin; Calreticulin family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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