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CERS3 ceramide synthase 3 [ Apteryx rowi (Okarito brown kiwi) ]

Gene ID: 112969803, updated on 15-Mar-2024

Summary

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Gene symbol
CERS3
Gene description
ceramide synthase 3
See related
Ensembl:ENSARWG00000003959
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx rowi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human mouse all
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Genomic context

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See CERS3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current aptRow1 (GCF_003343035.1) Unplaced Scaffold NW_020447308.1 (5091141..5143039, complement)

NW_020447308.1Genomic Context describing neighboring genes Neighboring gene LysM domain containing 4 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 17 Neighboring gene lines homolog 1 Neighboring gene ankyrin repeat and SOCS box containing 7 Neighboring gene aldehyde dehydrogenase 1 family member A3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020447308 Unplaced Scaffold Reference aptRow1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sphingosine N-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ceramide synthase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apteryx rowi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aptRow1

Genomic

  1. NW_020447308.1 Reference aptRow1

    Range
    5091141..5143039 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026073477.1 → XP_025929262.1  ceramide synthase 3 isoform X2

    Conserved Domains (2) summary
    cd00086
    Location:74 → 125
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam03798
    Location:135 → 329
    TRAM_LAG1_CLN8; TLC domain

  2. XM_026073465.1 → XP_025929250.1  ceramide synthase 3 isoform X2

    Related
    ENSARWP00000005557.1, ENSARWT00000006370.1
    Conserved Domains (2) summary
    cd00086
    Location:74 → 125
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam03798
    Location:135 → 329
    TRAM_LAG1_CLN8; TLC domain

  3. XM_026073456.1 → XP_025929241.1  ceramide synthase 3 isoform X1

    Related
    ENSARWP00000005561.1, ENSARWT00000006374.1
    Conserved Domains (2) summary
    cd00086
    Location:74 → 125
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam03798
    Location:135 → 329
    TRAM_LAG1_CLN8; TLC domain

RNA

  1. XR_003254805.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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