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CRYL1 crystallin lambda 1 [ Apteryx rowi (Okarito brown kiwi) ]

Gene ID: 112968342, updated on 15-Mar-2024

Summary

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Gene symbol
CRYL1
Gene description
crystallin lambda 1
See related
Ensembl:ENSARWG00000013529
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx rowi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human mouse all
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Genomic context

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See CRYL1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current aptRow1 (GCF_003343035.1) Unplaced Scaffold NW_020449542.1 (28050..93449)

NW_020449542.1Genomic Context describing neighboring genes Neighboring gene intraflagellar transport 88 Neighboring gene gap junction beta-6 protein Neighboring gene gap junction beta-6 protein-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020449542 Unplaced Scaffold Reference aptRow1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-gulonate 3-dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables NAD+ binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lambda-crystallin homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apteryx rowi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aptRow1

Genomic

  1. NW_020449542.1 Reference aptRow1

    Range
    28050..93449
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026070499.1 → XP_025926284.1  lambda-crystallin homolog isoform X3

    Related
    ENSARWP00000019743.1, ENSARWT00000022403.1
    Conserved Domains (1) summary
    cl27647
    Location:2 → 257
    3HCDH; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain

  2. XM_026070497.1 → XP_025926282.1  lambda-crystallin homolog isoform X1

    Related
    ENSARWP00000019742.1, ENSARWT00000022402.1
    Conserved Domains (1) summary
    cl27647
    Location:2 → 311
    3HCDH; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain

  3. XM_026070498.1 → XP_025926283.1  lambda-crystallin homolog isoform X2

    Conserved Domains (1) summary
    cl27647
    Location:1 → 262
    3HCDH; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
Nucleotide Protein
Heading Accession and Version

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