U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PUDP pseudouridine 5'-phosphatase [ Apteryx rowi (Okarito brown kiwi) ]

Gene ID: 112967788, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
PUDP
Gene description
pseudouridine 5'-phosphatase
See related
Ensembl:ENSARWG00000016759
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx rowi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PUDP in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current aptRow1 (GCF_003343035.1) Unplaced Scaffold NW_020449308.1 (215646..297885)

NW_020449308.1Genomic Context describing neighboring genes Neighboring gene steroid sulfatase Neighboring gene uncharacterized LOC112967789 Neighboring gene neuroligin 4 X-linked

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_020449308 Unplaced Scaffold Reference aptRow1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
pseudouridine-5'-phosphatase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Apteryx rowi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aptRow1

Genomic

  1. NW_020449308.1 Reference aptRow1

    Range
    215646..297885
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026069313.1 → XP_025925098.1  pseudouridine-5'-phosphatase isoform X1

    Related
    ENSARWP00000024605.1, ENSARWT00000027870.1
    Conserved Domains (1) summary
    cd07529
    Location:18 → 205
    HAD_AtGPP-like; subfamily of beta-phosphoglucomutase-like family, similar to Arabidopsis thaliana Gpp1 and Gpp2

  2. XM_026069314.1 → XP_025925099.1  pseudouridine-5'-phosphatase isoform X2

    Conserved Domains (1) summary
    cl21460
    Location:3 → 178
    HAD_like; Haloacid Dehalogenase-like Hydrolases
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.