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ACO2 aconitase 2 [ Apteryx rowi (Okarito brown kiwi) ]

Gene ID: 112967707, updated on 15-Mar-2024

Summary

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Gene symbol
ACO2
Gene description
aconitase 2
See related
Ensembl:ENSARWG00000016025
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx rowi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See ACO2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current aptRow1 (GCF_003343035.1) Unplaced Scaffold NW_020449274.1 (1146184..1157779, complement)

NW_020449274.1Genomic Context describing neighboring genes Neighboring gene cold shock domain containing C2 Neighboring gene RNA polymerase III subunit H

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020449274 Unplaced Scaffold Reference aptRow1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables aconitate hydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aconitate hydratase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apteryx rowi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aptRow1

Genomic

  1. NW_020449274.1 Reference aptRow1

    Range
    1146184..1157779 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026069141.1 → XP_025924926.1  aconitate hydratase, mitochondrial

    Related
    ENSARWP00000023943.1, ENSARWT00000027129.1
    Conserved Domains (1) summary
    cl28376
    Location:3 → 621
    AcnA; Aconitase A [Energy production and conversion]
Nucleotide Protein
Heading Accession and Version

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