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SI sucrase-isomaltase [ Apteryx rowi (Okarito brown kiwi) ]

Gene ID: 112963856, updated on 15-Mar-2024

Summary

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Gene symbol
SI
Gene description
sucrase-isomaltase
See related
Ensembl:ENSARWG00000000113
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx rowi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
47
Annotation release Status Assembly Chr Location
100 current aptRow1 (GCF_003343035.1) Unplaced Scaffold NW_020447197.1 (6254632..6310200)

NW_020447197.1Genomic Context describing neighboring genes Neighboring gene butyrylcholinesterase Neighboring gene SLIT and NTRK like family member 3 Neighboring gene serine palmitoyltransferase small subunit B-like Neighboring gene otolin 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020447197 Unplaced Scaffold Reference aptRow1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sucrase-isomaltase, intestinal

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apteryx rowi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aptRow1

Genomic

  1. NW_020447197.1 Reference aptRow1

    Range
    6254632..6310200
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026061302.1 → XP_025917087.1  sucrase-isomaltase, intestinal

    Related
    ENSARWP00000000267.1, ENSARWT00000000325.1
    Conserved Domains (6) summary
    cd00111
    Location:919 → 957
    Trefoil; P or trefoil or TFF domain; Trefoil factor family domain peptides are mucin-associated molecules, largely found in epithelia of gastrointestinal tissues. Function is not known but it was originally identified from mucosal tissues, where it may have a ...
    cd06602
    Location:325 → 689
    GH31_MGAM_SI_GAA; maltase-glucoamylase, sucrase-isomaltase, lysosomal acid alpha-glucosidase
    cd14752
    Location:1074 → 1195
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)
    pfam00088
    Location:47 → 89
    Trefoil; Trefoil (P-type) domain
    pfam01055
    Location:1176 → 1676
    Glyco_hydro_31; Glycosyl hydrolases family 31
    pfam16863
    Location:107 → 216
    NtCtMGAM_N; N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase
Nucleotide Protein
Heading Accession and Version

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