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GALNT16 polypeptide N-acetylgalactosaminyltransferase 16 [ Apteryx rowi (Okarito brown kiwi) ]

Gene ID: 112963673, updated on 15-Mar-2024

Summary

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Gene symbol
GALNT16
Gene description
polypeptide N-acetylgalactosaminyltransferase 16
See related
Ensembl:ENSARWG00000001472
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx rowi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human mouse all
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Genomic context

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See GALNT16 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current aptRow1 (GCF_003343035.1) Unplaced Scaffold NW_020448008.1 (891690..965328, complement)

NW_020448008.1Genomic Context describing neighboring genes Neighboring gene pleckstrin homology and coiled-coil domain containing D1 Neighboring gene solute carrier family 39 member 9 Neighboring gene ERH mRNA splicing and mitosis factor Neighboring gene exonuclease 3'-5' domain containing 2 Neighboring gene DDB1 and CUL4 associated factor 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020448008 Unplaced Scaffold Reference aptRow1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 16

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apteryx rowi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aptRow1

Genomic

  1. NW_020448008.1 Reference aptRow1

    Range
    891690..965328 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026060958.1 → XP_025916743.1  polypeptide N-acetylgalactosaminyltransferase 16

    Related
    ENSARWP00000001921.1, ENSARWT00000002258.1
    Conserved Domains (2) summary
    cd02510
    Location:138 → 432
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:448 → 561
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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