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IDH2 isocitrate dehydrogenase (NADP(+)) 2 [ Apteryx rowi (Okarito brown kiwi) ]

Gene ID: 112963580, updated on 15-Mar-2024

Summary

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Gene symbol
IDH2
Gene description
isocitrate dehydrogenase (NADP(+)) 2
See related
Ensembl:ENSARWG00000013870
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx rowi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human mouse all
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Genomic context

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See IDH2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current aptRow1 (GCF_003343035.1) Unplaced Scaffold NW_020447975.1 (1633187..1640897, complement)

NW_020447975.1Genomic Context describing neighboring genes Neighboring gene AP-3 complex subunit sigma-2 Neighboring gene zinc finger protein 710 Neighboring gene semaphorin 4B Neighboring gene calcium and integrin binding 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020447975 Unplaced Scaffold Reference aptRow1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables isocitrate dehydrogenase (NADP+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in isocitrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
isocitrate dehydrogenase [NADP], mitochondrial
Names
isocitrate dehydrogenase (NADP(+)) 2, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apteryx rowi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aptRow1

Genomic

  1. NW_020447975.1 Reference aptRow1

    Range
    1633187..1640897 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026060745.1 → XP_025916530.1  isocitrate dehydrogenase [NADP], mitochondrial

    Related
    ENSARWP00000020427.1, ENSARWT00000023181.1
    Conserved Domains (1) summary
    PTZ00435
    Location:1 → 400
    PTZ00435; isocitrate dehydrogenase; Provisional
Nucleotide Protein
Heading Accession and Version

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