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PNPLA2 patatin like phospholipase domain containing 2 [ Apteryx rowi (Okarito brown kiwi) ]

Gene ID: 112962696, updated on 18-Sep-2024

Summary

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Gene symbol
PNPLA2
Gene description
patatin like phospholipase domain containing 2
See related
Ensembl:ENSARWG00000008172
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx rowi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human mouse all
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Genomic context

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See PNPLA2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current aptRow1 (GCF_003343035.1) Unplaced Scaffold NW_020447775.1 (775291..805564, complement)

NW_020447775.1Genomic Context describing neighboring genes Neighboring gene CD151 molecule (Raph blood group) Neighboring gene calcium release activated channel regulator 2B Neighboring gene small nucleolar RNA SNORA52 Neighboring gene ribosomal protein lateral stalk subunit P2 Neighboring gene p53-induced death domain protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020447775 Unplaced Scaffold Reference aptRow1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables triacylglycerol lipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of triglyceride catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
patatin-like phospholipase domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apteryx rowi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aptRow1

Genomic

  1. NW_020447775.1 Reference aptRow1

    Range
    775291..805564 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026059101.1 → XP_025914886.1  patatin-like phospholipase domain-containing protein 2

    Related
    ENSARWP00000011824.1, ENSARWT00000013466.1
    Conserved Domains (1) summary
    cd07220
    Location:16 → 263
    Pat_PNPLA2; Patatin-like phospholipase domain containing protein 2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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