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GCNT7 glucosaminyl (N-acetyl) transferase family member 7 [ Apteryx rowi (Okarito brown kiwi) ]

Gene ID: 112962272, updated on 15-Mar-2024

Summary

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Gene symbol
GCNT7
Gene description
glucosaminyl (N-acetyl) transferase family member 7
See related
Ensembl:ENSARWG00000009468
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx rowi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human all
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Genomic context

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See GCNT7 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current aptRow1 (GCF_003343035.1) Unplaced Scaffold NW_020447195.1 (5392286..5408167, complement)

NW_020447195.1Genomic Context describing neighboring genes Neighboring gene aurora kinase A Neighboring gene cleavage stimulation factor subunit 1 Neighboring gene Cas scaffold protein family member 4 Neighboring gene replication termination factor 2 Neighboring gene transcription factor AP-2 gamma Neighboring gene bone morphogenetic protein 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020447195 Unplaced Scaffold Reference aptRow1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apteryx rowi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aptRow1

Genomic

  1. NW_020447195.1 Reference aptRow1

    Range
    5392286..5408167 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026058399.1 → XP_025914184.1  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 7

    Conserved Domains (1) summary
    cl27418
    Location:113 → 376
    Branch; Core-2/I-Branching enzyme

  2. XM_026058321.1 → XP_025914106.1  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 7

    Conserved Domains (1) summary
    cl27418
    Location:113 → 376
    Branch; Core-2/I-Branching enzyme

  3. XM_026058469.1 → XP_025914254.1  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 7

    Related
    ENSARWP00000013700.1, ENSARWT00000015644.1
    Conserved Domains (1) summary
    cl27418
    Location:113 → 376
    Branch; Core-2/I-Branching enzyme
Nucleotide Protein
Heading Accession and Version

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