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FBXO2 F-box protein 2 [ Nothoprocta perdicaria ]

Gene ID: 112959571, updated on 15-Mar-2024

Summary

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Gene symbol
FBXO2
Gene description
F-box protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothoprocta perdicaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Tinamiformes; Tinamidae; Nothoprocta
Orthologs
human mouse all
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Genomic context

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See FBXO2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current notPer1 (GCF_003342845.1) Unplaced Scaffold NW_020454283.1 (121805..127757)

NW_020454283.1Genomic Context describing neighboring genes Neighboring gene dorsal inhibitory axon guidance protein Neighboring gene F-box only protein 6-like Neighboring gene uncharacterized LOC112959574 Neighboring gene mitotic arrest deficient 2 like 2 Neighboring gene dispatched RND transporter family member 3 Neighboring gene UbiA prenyltransferase domain containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020454283 Unplaced Scaffold Reference notPer1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycoprotein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box only protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nothoprocta perdicaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference notPer1

Genomic

  1. NW_020454283.1 Reference notPer1

    Range
    121805..127757
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026053597.1 → XP_025909382.1  F-box only protein 2

    UniProtKB/TrEMBL
    A0A8C7ED89
    Conserved Domains (2) summary
    pfam00646
    Location:1 → 46
    F-box; F-box domain
    pfam04300
    Location:67 → 245
    FBA; F-box associated region

  2. XM_026053596.1 → XP_025909381.1  F-box only protein 2

    UniProtKB/TrEMBL
    A0A8C7ED89
    Conserved Domains (2) summary
    pfam00646
    Location:1 → 46
    F-box; F-box domain
    pfam04300
    Location:67 → 245
    FBA; F-box associated region
Nucleotide Protein
Heading Accession and Version

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