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FREM1 FRAS1 related extracellular matrix 1 [ Nothoprocta perdicaria ]

Gene ID: 112958808, updated on 15-Mar-2024

Summary

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Gene symbol
FREM1
Gene description
FRAS1 related extracellular matrix 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothoprocta perdicaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Tinamiformes; Tinamidae; Nothoprocta
Orthologs
human mouse all
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Genomic context

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See FREM1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
36
Annotation release Status Assembly Chr Location
100 current notPer1 (GCF_003342845.1) Unplaced Scaffold NW_020456199.1 (2791245..2849863, complement)

NW_020456199.1Genomic Context describing neighboring genes Neighboring gene zinc finger DHHC-type palmitoyltransferase 21 Neighboring gene cerberus 1, DAN family BMP antagonist Neighboring gene tetratricopeptide repeat domain 39B Neighboring gene small nuclear RNA activating complex polypeptide 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020456199 Unplaced Scaffold Reference notPer1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell communication IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
FRAS1-related extracellular matrix protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nothoprocta perdicaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference notPer1

Genomic

  1. NW_020456199.1 Reference notPer1

    Range
    2791245..2849863 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026052739.1 → XP_025908524.1  FRAS1-related extracellular matrix protein 1

    Conserved Domains (3) summary
    smart00034
    Location:2059 → 2181
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    pfam16184
    Location:1490 → 1598
    Cadherin_3; Cadherin-like
    cl02522
    Location:1742 → 1831
    Calx-beta; Calx-beta domain
Nucleotide Protein
Heading Accession and Version

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