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GCNT1 glucosaminyl (N-acetyl) transferase 1 [ Nothoprocta perdicaria ]

Gene ID: 112958208, updated on 15-Mar-2024

Summary

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Gene symbol
GCNT1
Gene description
glucosaminyl (N-acetyl) transferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothoprocta perdicaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Tinamiformes; Tinamidae; Nothoprocta
Orthologs
human mouse all
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Genomic context

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See GCNT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current notPer1 (GCF_003342845.1) Unplaced Scaffold NW_020456110.1 (1083906..1086580)

NW_020456110.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112958212 Neighboring gene riboflavin kinase Neighboring gene prune homolog 2 with BCH domain Neighboring gene vacuolar protein sorting 13 homolog A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020456110 Unplaced Scaffold Reference notPer1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase
Names
glucosaminyl (N-acetyl) transferase 1, core 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nothoprocta perdicaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference notPer1

Genomic

  1. NW_020456110.1 Reference notPer1

    Range
    1083906..1086580
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026052009.1 → XP_025907794.1  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase

    UniProtKB/TrEMBL
    A0A8C6ZU15
    Conserved Domains (1) summary
    pfam02485
    Location:121 → 389
    Branch; Core-2/I-Branching enzyme
Nucleotide Protein
Heading Accession and Version

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