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HPSE2 heparanase 2 (inactive) [ Nothoprocta perdicaria ]

Gene ID: 112957066, updated on 15-Mar-2024

Summary

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Gene symbol
HPSE2
Gene description
heparanase 2 (inactive)
See related
Ensembl:ENSNPEG00000008817
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothoprocta perdicaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Tinamiformes; Tinamidae; Nothoprocta
Orthologs
human mouse all
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Genomic context

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See HPSE2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current notPer1 (GCF_003342845.1) Unplaced Scaffold NW_020455976.1 (663983..768662)

NW_020455976.1Genomic Context describing neighboring genes Neighboring gene cyclin and CBS domain divalent metal cation transport mediator 1 Neighboring gene uncharacterized LOC112957185 Neighboring gene uncharacterized LOC112957068 Neighboring gene uncharacterized LOC112957067 Neighboring gene pyridine nucleotide-disulphide oxidoreductase domain 2 Neighboring gene HPS1 biogenesis of lysosomal organelles complex 3 subunit 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020455976 Unplaced Scaffold Reference notPer1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, acting on glycosyl bonds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inactive heparanase-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nothoprocta perdicaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference notPer1

Genomic

  1. NW_020455976.1 Reference notPer1

    Range
    663983..768662
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026050626.1 → XP_025906411.1  inactive heparanase-2

    UniProtKB/TrEMBL
    A0A8C6ZE40
    Related
    ENSNPEP00000011759.1, ENSNPET00000012061.1
    Conserved Domains (1) summary
    pfam03662
    Location:198 → 398
    Glyco_hydro_79n; Glycosyl hydrolase family 79, N-terminal domain
Nucleotide Protein
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Gene LinkOut

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