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NDST1 N-deacetylase and N-sulfotransferase 1 [ Nothoprocta perdicaria ]

Gene ID: 112954415, updated on 15-Mar-2024

Summary

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Gene symbol
NDST1
Gene description
N-deacetylase and N-sulfotransferase 1
See related
Ensembl:ENSNPEG00000003351
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothoprocta perdicaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Tinamiformes; Tinamidae; Nothoprocta
Orthologs
human mouse all
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Genomic context

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See NDST1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current notPer1 (GCF_003342845.1) Unplaced Scaffold NW_020455754.1 (3548021..3558332)

NW_020455754.1Genomic Context describing neighboring genes Neighboring gene PPARG coactivator 1 beta Neighboring gene ribosomal protein S14 Neighboring gene synaptopodin Neighboring gene myozenin 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020455754 Unplaced Scaffold Reference notPer1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine N-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nothoprocta perdicaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference notPer1

Genomic

  1. NW_020455754.1 Reference notPer1

    Range
    3548021..3558332
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026047609.1 → XP_025903394.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1

    UniProtKB/TrEMBL
    A0A8C6YS26, A0A8C6YU45
    Related
    ENSNPEP00000004389.1, ENSNPET00000004488.1
    Conserved Domains (2) summary
    pfam00685
    Location:600 → 850
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:30 → 510
    HSNSD; heparan sulfate-N-deacetylase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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