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ACSS1 acyl-CoA synthetase short chain family member 1 [ Nothoprocta perdicaria ]

Gene ID: 112949337, updated on 15-Mar-2024

Summary

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Gene symbol
ACSS1
Gene description
acyl-CoA synthetase short chain family member 1
See related
Ensembl:ENSNPEG00000003174
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothoprocta perdicaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Tinamiformes; Tinamidae; Nothoprocta
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See ACSS1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current notPer1 (GCF_003342845.1) Unplaced Scaffold NW_020455522.1 (446613..478962, complement)

NW_020455522.1Genomic Context describing neighboring genes Neighboring gene cystatin F Neighboring gene adipocyte plasma membrane associated protein Neighboring gene tau tubulin kinase 1 Neighboring gene solute carrier family 22 member 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020455522 Unplaced Scaffold Reference notPer1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables AMP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables acetate-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acetyl-CoA biosynthetic process from acetate IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acetyl-coenzyme A synthetase 2-like, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nothoprocta perdicaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference notPer1

Genomic

  1. NW_020455522.1 Reference notPer1

    Range
    446613..478962 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026041729.1 → XP_025897514.1  acetyl-coenzyme A synthetase 2-like, mitochondrial

    UniProtKB/TrEMBL
    A0A8C6YTH5
    Related
    ENSNPEP00000004137.1, ENSNPET00000004233.1
    Conserved Domains (1) summary
    cl27677
    Location:4 → 599
    PRK07788; acyl-CoA synthetase; Validated
Nucleotide Protein
Heading Accession and Version

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