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FUCA2 alpha-L-fucosidase 2 [ Nothoprocta perdicaria ]

Gene ID: 112947166, updated on 15-Mar-2024

Summary

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Gene symbol
FUCA2
Gene description
alpha-L-fucosidase 2
See related
Ensembl:ENSNPEG00000008129
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothoprocta perdicaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Tinamiformes; Tinamidae; Nothoprocta
Orthologs
human mouse all
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Genomic context

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See FUCA2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current notPer1 (GCF_003342845.1) Unplaced Scaffold NW_020455423.1 (1036908..1049184, complement)

NW_020455423.1Genomic Context describing neighboring genes Neighboring gene adenosine deaminase tRNA specific 2 Neighboring gene peroxisomal biogenesis factor 3 Neighboring gene phosphatase and actin regulator 2 Neighboring gene LTV1 ribosome biogenesis factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020455423 Unplaced Scaffold Reference notPer1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-L-fucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycoside catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
plasma alpha-L-fucosidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nothoprocta perdicaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference notPer1

Genomic

  1. NW_020455423.1 Reference notPer1

    Range
    1036908..1049184 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026039189.1 → XP_025894974.1  plasma alpha-L-fucosidase isoform X1

    UniProtKB/TrEMBL
    A0A8C7ED31
    Conserved Domains (2) summary
    smart00812
    Location:10 → 347
    Alpha_L_fucos; Alpha-L-fucosidase
    pfam16757
    Location:310 → 398
    Fucosidase_C; Alpha-L-fucosidase C-terminal domain

  2. XM_026039190.1 → XP_025894975.1  plasma alpha-L-fucosidase isoform X2

    UniProtKB/TrEMBL
    A0A8C7ED31
    Related
    ENSNPEP00000011283.1, ENSNPET00000011570.1
    Conserved Domains (2) summary
    smart00812
    Location:1 → 324
    Alpha_L_fucos; Alpha-L-fucosidase
    pfam16757
    Location:287 → 375
    Fucosidase_C; Alpha-L-fucosidase C-terminal domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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