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CHST1 carbohydrate sulfotransferase 1 [ Nothoprocta perdicaria ]

Gene ID: 112942523, updated on 15-Mar-2024

Summary

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Gene symbol
CHST1
Gene description
carbohydrate sulfotransferase 1
See related
Ensembl:ENSNPEG00000004022
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothoprocta perdicaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Tinamiformes; Tinamidae; Nothoprocta
Orthologs
human mouse all
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Genomic context

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See CHST1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current notPer1 (GCF_003342845.1) Unplaced Scaffold NW_020454416.1 (2223191..2232810, complement)

NW_020454416.1Genomic Context describing neighboring genes Neighboring gene astacin-like metalloendopeptidase Neighboring gene transmembrane protein 263-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020454416 Unplaced Scaffold Reference notPer1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables keratan sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in keratan sulfate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nothoprocta perdicaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference notPer1

Genomic

  1. NW_020454416.1 Reference notPer1

    Range
    2223191..2232810 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026033470.1 → XP_025889255.1  carbohydrate sulfotransferase 1

    UniProtKB/TrEMBL
    A0A8C6YUB4
    Related
    ENSNPEP00000005306.1, ENSNPET00000005438.1
    Conserved Domains (1) summary
    pfam00685
    Location:210 → 392
    Sulfotransfer_1; Sulfotransferase domain

  2. XM_026033469.1 → XP_025889254.1  carbohydrate sulfotransferase 1

    UniProtKB/TrEMBL
    A0A8C6YUB4
    Conserved Domains (1) summary
    pfam00685
    Location:210 → 392
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

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