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PLA2G12A phospholipase A2 group XIIA [ Vulpes vulpes (red fox) ]

Gene ID: 112934210, updated on 18-Sep-2024

Summary

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Gene symbol
PLA2G12A
Gene description
phospholipase A2 group XIIA
See related
Ensembl:ENSVVUG00000017587
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes vulpes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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See PLA2G12A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current VulVul2.2 (GCF_003160815.1) Unplaced Scaffold NW_020356572.1 (4976960..4993260, complement)

NW_020356572.1Genomic Context describing neighboring genes Neighboring gene mitochondrial calcium uniporter dominant negative subunit beta Neighboring gene caspase 6 Neighboring gene U6 spliceosomal RNA Neighboring gene complement factor I

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020356572 Unplaced Scaffold Reference VulVul2.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phospholipase A2 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in arachidonate secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
group XIIA secretory phospholipase A2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes vulpes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VulVul2.2 Primary Assembly

Genomic

  1. NW_020356572.1 Reference VulVul2.2 Primary Assembly

    Range
    4976960..4993260 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026017599.1 → XP_025873384.1  group XIIA secretory phospholipase A2

    UniProtKB/TrEMBL
    A0A3Q7T8H9
    Related
    ENSVVUP00000023967.1, ENSVVUT00000031695.1
    Conserved Domains (1) summary
    pfam06951
    Location:25 → 190
    PLA2G12; Group XII secretory phospholipase A2 precursor (PLA2G12)

RNA

  1. XR_003237857.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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