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CACNA2D1 calcium voltage-gated channel auxiliary subunit alpha2delta 1 [ Vulpes vulpes (red fox) ]

Gene ID: 112925398, updated on 15-Mar-2024

Summary

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Gene symbol
CACNA2D1
Gene description
calcium voltage-gated channel auxiliary subunit alpha2delta 1
See related
Ensembl:ENSVVUG00000019647
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes vulpes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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See CACNA2D1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
39
Annotation release Status Assembly Chr Location
100 current VulVul2.2 (GCF_003160815.1) Unplaced Scaffold NW_020356491.1 (7318202..7720590, complement)

NW_020356491.1Genomic Context describing neighboring genes Neighboring gene zinc finger CCCH domain-containing protein 14-like Neighboring gene hepatocyte growth factor Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC112925346 Neighboring gene uncharacterized LOC112925347

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020356491 Unplaced Scaffold Reference VulVul2.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables voltage-gated calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of L-type voltage-gated calcium channel complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
voltage-dependent calcium channel subunit alpha-2/delta-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes vulpes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VulVul2.2 Primary Assembly

Genomic

  1. NW_020356491.1 Reference VulVul2.2 Primary Assembly

    Range
    7318202..7720590 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026006121.1 → XP_025861906.1  voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X4

    UniProtKB/TrEMBL
    A0A3Q7T0Q2
    Conserved Domains (4) summary
    cd01463
    Location:200 → 378
    vWA_VGCC_like; VWA Voltage gated Calcium channel like: Voltage-gated calcium channels are a complex of five proteins: alpha 1, beta 1, gamma, alpha 2 and delta. The alpha 2 and delta subunits result from proteolytic processing of a single gene product and carries at ...
    pfam02743
    Location:419 → 559
    dCache_1; Cache domain
    pfam08399
    Location:71 → 184
    VWA_N; VWA N-terminal
    pfam08473
    Location:589 → 978
    VGCC_alpha2; Neuronal voltage-dependent calcium channel alpha 2acd

  2. XM_026006123.1 → XP_025861908.1  voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X5

    UniProtKB/TrEMBL
    A0A3Q7SXY4
    Related
    ENSVVUP00000026784.1, ENSVVUT00000035563.1
    Conserved Domains (4) summary
    cd01463
    Location:200 → 378
    vWA_VGCC_like; VWA Voltage gated Calcium channel like: Voltage-gated calcium channels are a complex of five proteins: alpha 1, beta 1, gamma, alpha 2 and delta. The alpha 2 and delta subunits result from proteolytic processing of a single gene product and carries at ...
    pfam02743
    Location:419 → 564
    dCache_1; Cache domain
    pfam08399
    Location:71 → 184
    VWA_N; VWA N-terminal
    pfam08473
    Location:587 → 976
    VGCC_alpha2; Neuronal voltage-dependent calcium channel alpha 2acd

  3. XM_026006120.1 → XP_025861905.1  voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X3

    UniProtKB/TrEMBL
    A0A3Q7U3Q5
    Conserved Domains (4) summary
    cd01463
    Location:200 → 378
    vWA_VGCC_like; VWA Voltage gated Calcium channel like: Voltage-gated calcium channels are a complex of five proteins: alpha 1, beta 1, gamma, alpha 2 and delta. The alpha 2 and delta subunits result from proteolytic processing of a single gene product and carries at ...
    pfam02743
    Location:419 → 564
    dCache_1; Cache domain
    pfam08399
    Location:71 → 184
    VWA_N; VWA N-terminal
    pfam08473
    Location:594 → 983
    VGCC_alpha2; Neuronal voltage-dependent calcium channel alpha 2acd

  4. XM_026006119.1 → XP_025861904.1  voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X2

    UniProtKB/TrEMBL
    A0A3Q7SJV9
    Conserved Domains (4) summary
    cd01463
    Location:200 → 378
    vWA_VGCC_like; VWA Voltage gated Calcium channel like: Voltage-gated calcium channels are a complex of five proteins: alpha 1, beta 1, gamma, alpha 2 and delta. The alpha 2 and delta subunits result from proteolytic processing of a single gene product and carries at ...
    pfam02743
    Location:419 → 578
    dCache_1; Cache domain
    pfam08399
    Location:71 → 184
    VWA_N; VWA N-terminal
    pfam08473
    Location:601 → 990
    VGCC_alpha2; Neuronal voltage-dependent calcium channel alpha 2acd

  5. XM_026006118.1 → XP_025861903.1  voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X1

    UniProtKB/TrEMBL
    A0A3Q7SXX9
    Conserved Domains (4) summary
    cd01463
    Location:200 → 378
    vWA_VGCC_like; VWA Voltage gated Calcium channel like: Voltage-gated calcium channels are a complex of five proteins: alpha 1, beta 1, gamma, alpha 2 and delta. The alpha 2 and delta subunits result from proteolytic processing of a single gene product and carries at ...
    pfam02743
    Location:419 → 578
    dCache_1; Cache domain
    pfam08399
    Location:71 → 184
    VWA_N; VWA N-terminal
    pfam08473
    Location:608 → 997
    VGCC_alpha2; Neuronal voltage-dependent calcium channel alpha 2acd
Nucleotide Protein Strain
Heading Accession and Version

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