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PLA2G4A phospholipase A2 group IVA [ Vulpes vulpes (red fox) ]

Gene ID: 112921831, updated on 15-Mar-2024

Summary

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Gene symbol
PLA2G4A
Gene description
phospholipase A2 group IVA
See related
Ensembl:ENSVVUG00000012327
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes vulpes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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See PLA2G4A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current VulVul2.2 (GCF_003160815.1) Unplaced Scaffold NW_020356470.1 (9500284..9652698)

NW_020356470.1Genomic Context describing neighboring genes Neighboring gene non-POU domain-containing octamer-binding protein pseudogene Neighboring gene prostaglandin-endoperoxide synthase 2 Neighboring gene transcription factor BTF3 pseudogene Neighboring gene complement factor H-related protein 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020356470 Unplaced Scaffold Reference VulVul2.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipase A2 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycerophospholipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytosolic phospholipase A2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes vulpes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VulVul2.2 Primary Assembly

Genomic

  1. NW_020356470.1 Reference VulVul2.2 Primary Assembly

    Range
    9500284..9652698
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026001209.1 → XP_025856994.1  cytosolic phospholipase A2

    UniProtKB/TrEMBL
    A0A3Q7TPB0
    Related
    ENSVVUP00000016737.1, ENSVVUT00000022034.1
    Conserved Domains (2) summary
    cd07200
    Location:144 → 730
    cPLA2_Grp-IVA; Group IVA cytosolic phospholipase A2; catalytic domain; Ca-dependent
    cd04036
    Location:20 → 138
    C2_cPLA2; C2 domain present in cytosolic PhosphoLipase A2 (cPLA2)

  2. XM_026001210.1 → XP_025856995.1  cytosolic phospholipase A2

    UniProtKB/TrEMBL
    A0A3Q7TPB0
    Related
    ENSVVUP00000016761.1, ENSVVUT00000022065.1
    Conserved Domains (2) summary
    cd07200
    Location:144 → 730
    cPLA2_Grp-IVA; Group IVA cytosolic phospholipase A2; catalytic domain; Ca-dependent
    cd04036
    Location:20 → 138
    C2_cPLA2; C2 domain present in cytosolic PhosphoLipase A2 (cPLA2)
Nucleotide Protein Strain
Heading Accession and Version

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