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GALK2 galactokinase 2 [ Vulpes vulpes (red fox) ]

Gene ID: 112920049, updated on 15-Mar-2024

Summary

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Gene symbol
GALK2
Gene description
galactokinase 2
See related
Ensembl:ENSVVUG00000016538
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes vulpes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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See GALK2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current VulVul2.2 (GCF_003160815.1) Unplaced Scaffold NW_020356463.1 (15315878..15444896)

NW_020356463.1Genomic Context describing neighboring genes Neighboring gene SECIS binding protein 2 like Neighboring gene COP9 signalosome subunit 2 Neighboring gene transfer RNA lysine (anticodon CUU) Neighboring gene fibroblast growth factor 7 Neighboring gene family with sequence similarity 227 member B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020356463 Unplaced Scaffold Reference VulVul2.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables galactokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in galactose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetylgalactosamine kinase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes vulpes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VulVul2.2 Primary Assembly

Genomic

  1. NW_020356463.1 Reference VulVul2.2 Primary Assembly

    Range
    15315878..15444896
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025998681.1 → XP_025854466.1  N-acetylgalactosamine kinase isoform X2

    UniProtKB/TrEMBL
    A0A3Q7SGQ1
    Related
    ENSVVUP00000022544.1, ENSVVUT00000029842.1
    Conserved Domains (1) summary
    cl26519
    Location:7 → 444
    GalKase_gal_bdg; Galactokinase galactose-binding signature

  2. XM_025998680.1 → XP_025854465.1  N-acetylgalactosamine kinase isoform X1

    UniProtKB/TrEMBL
    A0A3Q7TH20
    Related
    ENSVVUP00000022537.1, ENSVVUT00000029829.1
    Conserved Domains (1) summary
    cl26519
    Location:18 → 455
    GalKase_gal_bdg; Galactokinase galactose-binding signature

  3. XM_025998682.1 → XP_025854467.1  N-acetylgalactosamine kinase isoform X3

    UniProtKB/TrEMBL
    A0A3Q7T3C5
    Related
    ENSVVUP00000022532.1, ENSVVUT00000029824.1
    Conserved Domains (1) summary
    cl26519
    Location:18 → 371
    GalKase_gal_bdg; Galactokinase galactose-binding signature

RNA

  1. XR_003235014.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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