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EFNA1 ephrin A1 [ Vulpes vulpes (red fox) ]

Gene ID: 112918909, updated on 15-Mar-2024

Summary

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Gene symbol
EFNA1
Gene description
ephrin A1
See related
Ensembl:ENSVVUG00000002281
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes vulpes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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See EFNA1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current VulVul2.2 (GCF_003160815.1) Unplaced Scaffold NW_020356458.1 (18232899..18238720)

NW_020356458.1Genomic Context describing neighboring genes Neighboring gene ephrin A4 Neighboring gene ephrin A3 Neighboring gene solute carrier family 50 member 1 Neighboring gene dolichyl-phosphate mannosyltransferase subunit 3, regulatory

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020356458 Unplaced Scaffold Reference VulVul2.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ephrin receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ephrin receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ephrin-A1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes vulpes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VulVul2.2 Primary Assembly

Genomic

  1. NW_020356458.1 Reference VulVul2.2 Primary Assembly

    Range
    18232899..18238720
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025997206.1 → XP_025852991.1  ephrin-A1 isoform X2

    UniProtKB/TrEMBL
    A0A3Q7SCZ7
    Related
    ENSVVUP00000002919.1, ENSVVUT00000004036.1
    Conserved Domains (1) summary
    cd10425
    Location:19 → 148
    Ephrin-A_Ectodomain; Ectodomain of Ephrin A

  2. XM_025997205.1 → XP_025852990.1  ephrin-A1 isoform X1

    UniProtKB/TrEMBL
    A0A3Q7TCM4
    Conserved Domains (1) summary
    cd10425
    Location:98 → 219
    Ephrin-A_Ectodomain; Ectodomain of Ephrin A
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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