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CERS6 ceramide synthase 6 [ Vulpes vulpes (red fox) ]

Gene ID: 112916440, updated on 15-Mar-2024

Summary

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Gene symbol
CERS6
Gene description
ceramide synthase 6
See related
Ensembl:ENSVVUG00000016728
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes vulpes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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See CERS6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current VulVul2.2 (GCF_003160815.1) Unplaced Scaffold NW_020356450.1 (10581463..10882503, complement)

NW_020356450.1Genomic Context describing neighboring genes Neighboring gene nitric oxide synthase trafficking Neighboring gene SPC25 component of NDC80 kinetochore complex Neighboring gene serine/threonine kinase 39 Neighboring gene beta-1,3-galactosyltransferase 1 Neighboring gene U2 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020356450 Unplaced Scaffold Reference VulVul2.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sphingosine N-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ceramide synthase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes vulpes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VulVul2.2 Primary Assembly

Genomic

  1. NW_020356450.1 Reference VulVul2.2 Primary Assembly

    Range
    10581463..10882503 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025994107.1 → XP_025849892.1  ceramide synthase 6 isoform X2

    UniProtKB/TrEMBL
    A0A3Q7RUE2
    Related
    ENSVVUP00000022855.1, ENSVVUT00000030215.1
    Conserved Domains (2) summary
    cd00086
    Location:80 → 120
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam03798
    Location:131 → 324
    TRAM_LAG1_CLN8; TLC domain

  2. XM_025994106.1 → XP_025849891.1  ceramide synthase 6 isoform X1

    UniProtKB/TrEMBL
    A0A3Q7S579
    Related
    ENSVVUP00000022847.1, ENSVVUT00000030206.1
    Conserved Domains (2) summary
    cd00086
    Location:80 → 120
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam03798
    Location:131 → 324
    TRAM_LAG1_CLN8; TLC domain
Nucleotide Protein Strain
Heading Accession and Version

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