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LMAN2L lectin, mannose binding 2 like [ Vulpes vulpes (red fox) ]

Gene ID: 112915195, updated on 19-Jun-2024

Summary

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Gene symbol
LMAN2L
Gene description
lectin, mannose binding 2 like
See related
Ensembl:ENSVVUG00000000021
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes vulpes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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See LMAN2L in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current VulVul2.2 (GCF_003160815.1) Unplaced Scaffold NW_020356445.1 (9663590..9693224)

NW_020356445.1Genomic Context describing neighboring genes Neighboring gene cyclin and CBS domain divalent metal cation transport mediator 4 Neighboring gene uncharacterized LOC112915329 Neighboring gene fer-1 like family member 5 Neighboring gene KAT8 regulatory NSL complex subunit 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020356445 Unplaced Scaffold Reference VulVul2.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
VIP36-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes vulpes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VulVul2.2 Primary Assembly

Genomic

  1. NW_020356445.1 Reference VulVul2.2 Primary Assembly

    Range
    9663590..9693224
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025992535.1 → XP_025848320.1  VIP36-like protein isoform X1

    UniProtKB/TrEMBL
    A0A3Q7T0D0
    Conserved Domains (1) summary
    cl14058
    Location:50 → 309
    lectin_L-type; legume lectins

  2. XM_025992536.1 → XP_025848321.1  VIP36-like protein isoform X2

    UniProtKB/TrEMBL
    A0A3Q7S155
    Related
    ENSVVUP00000000036.1, ENSVVUT00000000036.1
    Conserved Domains (1) summary
    cl14058
    Location:50 → 298
    lectin_L-type; legume lectins

  3. XM_025992537.1 → XP_025848322.1  VIP36-like protein isoform X3

    UniProtKB/TrEMBL
    A0A3Q7RR85
    Conserved Domains (1) summary
    cl14058
    Location:35 → 164
    lectin_L-type; legume lectins

  4. XM_025992539.1 → XP_025848324.1  VIP36-like protein isoform X4

    UniProtKB/TrEMBL
    A0A3Q7RS11
    Conserved Domains (1) summary
    cl14058
    Location:21 → 153
    lectin_L-type; legume lectins

  5. XM_025992538.1 → XP_025848323.1  VIP36-like protein isoform X3

    UniProtKB/TrEMBL
    A0A3Q7RR85
    Conserved Domains (1) summary
    cl14058
    Location:35 → 164
    lectin_L-type; legume lectins
Nucleotide Protein Strain
Heading Accession and Version

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