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LOC112906412 alpha-1,2-mannosyltransferase ALG9-like [ Agrilus planipennis (emerald ash borer) ]

Gene ID: 112906412, updated on 21-Dec-2023

Summary

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Gene symbol
LOC112906412
Gene description
alpha-1,2-mannosyltransferase ALG9-like
See related
EnsemblRapid:LOC112906412
Gene type
protein coding
RefSeq status
MODEL
Organism
Agrilus planipennis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Elateriformia; Buprestoidea; Buprestidae; Agrilinae; Agrilus
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Genomic context

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See LOC112906412 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Apla_2.0 (GCF_000699045.2) Unplaced Scaffold NW_020438874.1 (644339..646929)

NW_020438874.1Genomic Context describing neighboring genes Neighboring gene alpha-1,2-mannosyltransferase ALG9 Neighboring gene splicing factor 45 Neighboring gene dynamin-like 120 kDa protein, mitochondrial Neighboring gene YTH domain-containing family protein Neighboring gene carbonic anhydrase beta

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020438874 Unplaced Scaffold Reference Apla_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,2-mannosyltransferase ALG9-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Agrilus planipennis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Apla_2.0 Primary Assembly

Genomic

  1. NW_020438874.1 Reference Apla_2.0 Primary Assembly

    Range
    644339..646929
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025980476.1 → XP_025836261.1  alpha-1,2-mannosyltransferase ALG9-like isoform X1

    UniProtKB/TrEMBL
    A0A7F5RJX6
    Related
    XP_025836261.1, XM_025980476.1
    Conserved Domains (1) summary
    pfam03901
    Location:53 → 483
    Glyco_transf_22; Alg9-like mannosyltransferase family

  2. XM_025980481.1 → XP_025836266.1  alpha-1,2-mannosyltransferase ALG9-like isoform X2

    UniProtKB/TrEMBL
    A0A1W4W5U9
    Related
    XP_025836266.1, XM_025980481.1
    Conserved Domains (1) summary
    pfam03901
    Location:53 → 483
    Glyco_transf_22; Alg9-like mannosyltransferase family

  3. XM_025980484.1 → XP_025836269.1  alpha-1,2-mannosyltransferase ALG9-like isoform X4

    UniProtKB/TrEMBL
    A0A1W4WHJ1
    Related
    XP_025836269.1, XM_025980484.1
    Conserved Domains (1) summary
    cl21590
    Location:53 → 371
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  4. XM_025980483.1 → XP_025836268.1  alpha-1,2-mannosyltransferase ALG9-like isoform X3

    UniProtKB/TrEMBL
    A0A7F5RJU8
    Related
    XP_025836268.1, XM_025980483.1
    Conserved Domains (1) summary
    cl21590
    Location:1 → 308
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
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