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LOC112882142 F-box protein GID2 [ Panicum hallii ]

Gene ID: 112882142, updated on 21-Dec-2023

Summary

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Gene symbol
LOC112882142
Gene description
F-box protein GID2
Locus tag
PAHAL_1G282200
Gene type
protein coding
RefSeq status
MODEL
Organism
Panicum hallii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum; Panicum sect. Panicum
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Genomic context

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See LOC112882142 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
100 current PHallii_v3.1 (GCF_002211085.1) 1 NC_038042.1 (48035366..48037205)

Chromosome 1 - NC_038042.1Genomic Context describing neighboring genes Neighboring gene CTL-like protein DDB_G0274487 Neighboring gene uncharacterized LOC112897799 Neighboring gene 14-3-3-like protein GF14-E Neighboring gene L10-interacting MYB domain-containing protein-like Neighboring gene cell division cycle protein 48 homolog pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_038042.1 Chromosome 1 Reference PHallii_v3.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gibberellic acid mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of gibberellic acid mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box protein GID2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panicum hallii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PHallii_v3.1

Genomic

  1. NC_038042.1 Reference PHallii_v3.1

    Range
    48035366..48037205
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025947132.1 → XP_025802917.1  F-box protein GID2

    UniProtKB/TrEMBL
    A0A2T8KWK8
    Conserved Domains (2) summary
    pfam12937
    Location:97 → 136
    F-box-like
    cl27351
    Location:45 → 97
    E3_binding; e3 binding domain
Nucleotide Protein Strain
Heading Accession and Version

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