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LOC112875877 hydroxyproline O-galactosyltransferase GALT6-like [ Panicum hallii ]

Gene ID: 112875877, updated on 21-Dec-2023

Summary

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Gene symbol
LOC112875877
Gene description
hydroxyproline O-galactosyltransferase GALT6-like
Locus tag
PAHAL_9G045300
Gene type
protein coding
RefSeq status
MODEL
Organism
Panicum hallii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum; Panicum sect. Panicum
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Genomic context

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See LOC112875877 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
7
Annotation release Status Assembly Chr Location
100 current PHallii_v3.1 (GCF_002211085.1) 9 NC_038050.1 (2494639..2499226)

Chromosome 9 - NC_038050.1Genomic Context describing neighboring genes Neighboring gene protein YLS3-like Neighboring gene uncharacterized LOC112875697 Neighboring gene uncharacterized LOC112875876 Neighboring gene hydroxyproline O-galactosyltransferase GALT6-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_038050.1 Chromosome 9 Reference PHallii_v3.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hydroxyproline O-galactosyltransferase GALT6-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panicum hallii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PHallii_v3.1

Genomic

  1. NC_038050.1 Reference PHallii_v3.1

    Range
    2494639..2499226
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025939879.1 → XP_025795664.1  hydroxyproline O-galactosyltransferase GALT6-like

    UniProtKB/TrEMBL
    A0A2S3IH27
    Conserved Domains (1) summary
    PLN03133
    Location:135 → 655
    PLN03133; beta-1,3-galactosyltransferase; Provisional
Nucleotide Protein Strain
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