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LOC112874865 cellulose synthase A catalytic subunit 7 [UDP-forming] [ Panicum hallii ]

Gene ID: 112874865, updated on 21-Dec-2023

Summary

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Gene symbol
LOC112874865
Gene description
cellulose synthase A catalytic subunit 7 [UDP-forming]
Locus tag
PAHAL_9G227600
Gene type
protein coding
RefSeq status
MODEL
Organism
Panicum hallii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum; Panicum sect. Panicum
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Genomic context

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See LOC112874865 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
6
Annotation release Status Assembly Chr Location
100 current PHallii_v3.1 (GCF_002211085.1) 9 NC_038050.1 (14926415..14930476, complement)

Chromosome 9 - NC_038050.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112873839 Neighboring gene nucleolin 2-like Neighboring gene transfer RNA glycine (anticodon GCC) Neighboring gene eukaryotic translation initiation factor Neighboring gene peroxisome biogenesis protein 12

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_038050.1 Chromosome 9 Reference PHallii_v3.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cellulose synthase (UDP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellulose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type primary cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cellulose synthase A catalytic subunit 7 [UDP-forming]

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panicum hallii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PHallii_v3.1

Genomic

  1. NC_038050.1 Reference PHallii_v3.1

    Range
    14926415..14930476 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025938429.1 → XP_025794214.1  cellulose synthase A catalytic subunit 7 [UDP-forming]

    UniProtKB/TrEMBL
    A0A2S3IM44, A0A2T7C5W4
    Conserved Domains (1) summary
    cl28038
    Location:38 → 1089
    Cellulose_synt; Cellulose synthase
Nucleotide Protein Strain
Heading Accession and Version

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