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LOC112872938 digalactosyldiacylglycerol synthase 2, chloroplastic-like [ Panicum hallii ]

Gene ID: 112872938, updated on 21-Dec-2023

Summary

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Gene symbol
LOC112872938
Gene description
digalactosyldiacylglycerol synthase 2, chloroplastic-like
Locus tag
PAHAL_9G518500
Gene type
protein coding
RefSeq status
MODEL
Organism
Panicum hallii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum; Panicum sect. Panicum
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Genomic context

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See LOC112872938 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
6
Annotation release Status Assembly Chr Location
100 current PHallii_v3.1 (GCF_002211085.1) 9 NC_038050.1 (65845261..65849828)

Chromosome 9 - NC_038050.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112877739 Neighboring gene probable mannose-1-phosphate guanylyltransferase 1 Neighboring gene serine/threonine-protein kinase ATG1c-like Neighboring gene flagellar attachment zone protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_038050.1 Chromosome 9 Reference PHallii_v3.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables digalactosyldiacylglycerol synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in galactolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast outer membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
digalactosyldiacylglycerol synthase 2, chloroplastic-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panicum hallii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PHallii_v3.1

Genomic

  1. NC_038050.1 Reference PHallii_v3.1

    Range
    65845261..65849828
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025935973.1 → XP_025791758.1  digalactosyldiacylglycerol synthase 2, chloroplastic-like

    UniProtKB/TrEMBL
    A0A2T7CEJ1, A0A2T8I5G2
    Conserved Domains (1) summary
    PLN02846
    Location:4 → 464
    PLN02846; digalactosyldiacylglycerol synthase

  2. XM_025935975.1 → XP_025791760.1  digalactosyldiacylglycerol synthase 2, chloroplastic-like

    UniProtKB/TrEMBL
    A0A2T7CEJ1, A0A2T8I5G2
    Conserved Domains (1) summary
    PLN02846
    Location:4 → 464
    PLN02846; digalactosyldiacylglycerol synthase

  3. XM_025935972.1 → XP_025791757.1  digalactosyldiacylglycerol synthase 2, chloroplastic-like

    UniProtKB/TrEMBL
    A0A2T7CEJ1, A0A2T8I5G2
    Conserved Domains (1) summary
    PLN02846
    Location:4 → 464
    PLN02846; digalactosyldiacylglycerol synthase

  4. XM_025935974.1 → XP_025791759.1  digalactosyldiacylglycerol synthase 2, chloroplastic-like

    UniProtKB/TrEMBL
    A0A2T7CEJ1, A0A2T8I5G2
    Conserved Domains (1) summary
    PLN02846
    Location:4 → 464
    PLN02846; digalactosyldiacylglycerol synthase
Nucleotide Protein Strain
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