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FREM1 FRAS1 related extracellular matrix 1 [ Puma concolor (puma) ]

Gene ID: 112871899, updated on 15-Mar-2024

Summary

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Gene symbol
FREM1
Gene description
FRAS1 related extracellular matrix 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Puma concolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Puma
Orthologs
human mouse all
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Genomic context

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See FREM1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
36
Annotation release Status Assembly Chr Location
100 current PumCon1.0 (GCF_003327715.1) Unplaced Scaffold NW_020337930.1 (50816332..50961661)

NW_020337930.1Genomic Context describing neighboring genes Neighboring gene ras-related C3 botulinum toxin substrate 1 pseudogene Neighboring gene tetratricopeptide repeat domain 39B Neighboring gene cerberus 1, DAN family BMP antagonist Neighboring gene zinc finger DHHC-type palmitoyltransferase 21

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020337930 Unplaced Scaffold Reference PumCon1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell communication IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
FRAS1-related extracellular matrix protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Puma concolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PumCon1.0 Primary Assembly

Genomic

  1. NW_020337930.1 Reference PumCon1.0 Primary Assembly

    Range
    50816332..50961661
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025934994.1 → XP_025790779.1  FRAS1-related extracellular matrix protein 1

    UniProtKB/TrEMBL
    A0A6P6ISK3
    Conserved Domains (3) summary
    smart00034
    Location:2078 → 2200
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    pfam16184
    Location:1506 → 1614
    Cadherin_3; Cadherin-like
    cl02522
    Location:1760 → 1846
    Calx-beta; Calx-beta domain
Nucleotide Protein
Heading Accession and Version

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