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RGN regucalcin [ Puma concolor (puma) ]

Gene ID: 112870809, updated on 15-Mar-2024

Summary

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Gene symbol
RGN
Gene description
regucalcin
Gene type
protein coding
RefSeq status
MODEL
Organism
Puma concolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Puma
Orthologs
human mouse all
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Genomic context

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See RGN in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current PumCon1.0 (GCF_003327715.1) Unplaced Scaffold NW_020340090.1 (82279487..82300204, complement)

NW_020340090.1Genomic Context describing neighboring genes Neighboring gene RNA binding motif protein 10 Neighboring gene NADH:ubiquinone oxidoreductase subunit B11 Neighboring gene jade family PHD finger 3 Neighboring gene 60S ribosomal protein L12-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020340090 Unplaced Scaffold Reference PumCon1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables enzyme regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables gluconolactonase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-ascorbic acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
regucalcin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Puma concolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PumCon1.0 Primary Assembly

Genomic

  1. NW_020340090.1 Reference PumCon1.0 Primary Assembly

    Range
    82279487..82300204 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025933857.1 → XP_025789642.1  regucalcin

    UniProtKB/TrEMBL
    A0A6P6ING0
    Conserved Domains (2) summary
    sd00039
    Location:105 → 149
    7WD40; WD40 repeat [structural motif]
    pfam08450
    Location:6 → 215
    SGL; SMP-30/Gluconolaconase/LRE-like region
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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