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NTNG1 netrin G1 [ Puma concolor (puma) ]

Gene ID: 112870251, updated on 15-Mar-2024

Summary

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Gene symbol
NTNG1
Gene description
netrin G1
Gene type
protein coding
RefSeq status
MODEL
Organism
Puma concolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Puma
Orthologs
human mouse all
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Genomic context

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See NTNG1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current PumCon1.0 (GCF_003327715.1) Unplaced Scaffold NW_020338243.1 (91923365..92258839)

NW_020338243.1Genomic Context describing neighboring genes Neighboring gene BRISC complex subunit Abraxas 2-like Neighboring gene protein arginine methyltransferase 6 Neighboring gene LYR motif-containing protein 4 pseudogene Neighboring gene uncharacterized LOC112864650 Neighboring gene vav guanine nucleotide exchange factor 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020338243 Unplaced Scaffold Reference PumCon1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell-cell adhesion mediator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
netrin-G1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Puma concolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PumCon1.0 Primary Assembly

Genomic

  1. NW_020338243.1 Reference PumCon1.0 Primary Assembly

    Range
    91923365..92258839
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025933392.1 → XP_025789177.1  netrin-G1 isoform X3

    UniProtKB/TrEMBL
    A0A6P6IM45
    Conserved Domains (3) summary
    cd00054
    Location:415 → 439
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00055
    Location:296 → 342
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    pfam00055
    Location:71 → 295
    Laminin_N; Laminin N-terminal (Domain VI)

  2. XM_025933384.1 → XP_025789169.1  netrin-G1 isoform X2

    UniProtKB/TrEMBL
    A0A6P6IMT7
    Conserved Domains (4) summary
    smart00180
    Location:386 → 433
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    cd00054
    Location:440 → 464
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00055
    Location:296 → 342
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    pfam00055
    Location:71 → 295
    Laminin_N; Laminin N-terminal (Domain VI)

  3. XM_025933400.1 → XP_025789185.1  netrin-G1 isoform X4

    UniProtKB/TrEMBL
    A0A6P6ILX2
    Conserved Domains (3) summary
    cd00054
    Location:395 → 419
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00055
    Location:296 → 342
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    pfam00055
    Location:71 → 295
    Laminin_N; Laminin N-terminal (Domain VI)

  4. XM_025933376.1 → XP_025789161.1  netrin-G1 isoform X1

    UniProtKB/TrEMBL
    A0A6P6ILN8
    Conserved Domains (3) summary
    smart00180
    Location:420 → 467
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    cd00055
    Location:296 → 342
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    pfam00055
    Location:71 → 295
    Laminin_N; Laminin N-terminal (Domain VI)

  5. XM_025933408.1 → XP_025789193.1  netrin-G1 isoform X5

    UniProtKB/TrEMBL
    A0A6P6IQM8
    Conserved Domains (3) summary
    cd00054
    Location:373 → 397
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00055
    Location:296 → 342
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    pfam00055
    Location:71 → 295
    Laminin_N; Laminin N-terminal (Domain VI)
Nucleotide Protein
Heading Accession and Version

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