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DGCR2 DiGeorge syndrome critical region gene 2 [ Puma concolor (puma) ]

Gene ID: 112870188, updated on 15-Mar-2024

Summary

Gene symbol
DGCR2
Gene description
DiGeorge syndrome critical region gene 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Puma concolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Puma
Orthologs
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Genomic context

See DGCR2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current PumCon1.0 (GCF_003327715.1) Unplaced Scaffold NW_020340053.1 (1508745..1606138, complement)

NW_020340053.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 2 homolog Neighboring gene carbonic anhydrase 15-like Neighboring gene testis specific serine kinase 1B Neighboring gene testis specific serine kinase 2

Genomic regions, transcripts, and products

Genomic Sequence:
NW_020340053 Unplaced Scaffold Reference PumCon1.0 Primary Assembly

General protein information

Preferred Names
integral membrane protein DGCR2/IDD

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Puma concolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PumCon1.0 Primary Assembly

Genomic

  1. NW_020340053.1 Reference PumCon1.0 Primary Assembly

    Range
    1508745..1606138 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025933283.1XP_025789068.1  integral membrane protein DGCR2/IDD isoform X4

    UniProtKB/TrEMBL
    A0A6P6IQB2
    Conserved Domains (2) summary
    cd03599
    Location:71223
    CLECT_DGCR2_like; C-type lectin-like domain (CTLD) of the type found in DGCR2, an integral membrane protein deleted in DiGeorge Syndrome (DGS)
    smart00214
    Location:227288
    VWC; von Willebrand factor (vWF) type C domain
  2. XM_025933282.1XP_025789067.1  integral membrane protein DGCR2/IDD isoform X3

    UniProtKB/TrEMBL
    A0A6P6ILT5
    Conserved Domains (2) summary
    cd03599
    Location:74226
    CLECT_DGCR2_like; C-type lectin-like domain (CTLD) of the type found in DGCR2, an integral membrane protein deleted in DiGeorge Syndrome (DGS)
    smart00214
    Location:230291
    VWC; von Willebrand factor (vWF) type C domain
  3. XM_025933281.1XP_025789066.1  integral membrane protein DGCR2/IDD isoform X2

    UniProtKB/TrEMBL
    A0A6P6ILE2
    Conserved Domains (3) summary
    cd03599
    Location:112264
    CLECT_DGCR2_like; C-type lectin-like domain (CTLD) of the type found in DGCR2, an integral membrane protein deleted in DiGeorge Syndrome (DGS)
    smart00214
    Location:268326
    VWC; von Willebrand factor (vWF) type C domain
    cd00112
    Location:3066
    LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
  4. XM_025933280.1XP_025789065.1  integral membrane protein DGCR2/IDD isoform X1

    UniProtKB/TrEMBL
    A0A6P6ILJ9
    Conserved Domains (3) summary
    cd03599
    Location:115267
    CLECT_DGCR2_like; C-type lectin-like domain (CTLD) of the type found in DGCR2, an integral membrane protein deleted in DiGeorge Syndrome (DGS)
    smart00214
    Location:271329
    VWC; von Willebrand factor (vWF) type C domain
    cd00112
    Location:3066
    LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...