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VDAC1 voltage dependent anion channel 1 [ Puma concolor (puma) ]

Gene ID: 112861387, updated on 15-Mar-2024

Summary

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Gene symbol
VDAC1
Gene description
voltage dependent anion channel 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Puma concolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Puma
Orthologs
human mouse all
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Genomic context

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See VDAC1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current PumCon1.0 (GCF_003327715.1) Unplaced Scaffold NW_020339444.1 (130433452..130459992)

NW_020339444.1Genomic Context describing neighboring genes Neighboring gene S-phase kinase associated protein 1 Neighboring gene transcription factor 7 Neighboring gene U6 spliceosomal RNA Neighboring gene chromosome unknown C5orf15 homolog Neighboring gene follistatin like 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020339444 Unplaced Scaffold Reference PumCon1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables voltage-gated monoatomic anion channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in monoatomic anion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial outer membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: voltage-dependent anion-selective channel protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Puma concolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PumCon1.0 Primary Assembly

Genomic

  1. NW_020339444.1 Reference PumCon1.0 Primary Assembly

    Range
    130433452..130459992
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025924748.1 → XP_025780533.1  LOW QUALITY PROTEIN: voltage-dependent anion-selective channel protein 1

    UniProtKB/TrEMBL
    A0A6P6HZH0
    Conserved Domains (1) summary
    cd07306
    Location:4 → 282
    Porin3_VDAC; Voltage-dependent anion channel of the outer mitochondrial membrane
Nucleotide Protein
Heading Accession and Version

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