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COG6 component of oligomeric golgi complex 6 [ Puma concolor (puma) ]

Gene ID: 112861285, updated on 15-Mar-2024

Summary

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Gene symbol
COG6
Gene description
component of oligomeric golgi complex 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Puma concolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Puma
Orthologs
human mouse all
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Genomic context

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See COG6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current PumCon1.0 (GCF_003327715.1) Unplaced Scaffold NW_020339444.1 (218524527..218606734, complement)

NW_020339444.1Genomic Context describing neighboring genes Neighboring gene ubiquitin-40S ribosomal protein S27a pseudogene Neighboring gene mitochondrial ribosomal protein S31 Neighboring gene U6 spliceosomal RNA Neighboring gene forkhead box O1 Neighboring gene LHFPL tetraspan subfamily member 6 Neighboring gene NHL repeat containing 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020339444 Unplaced Scaffold Reference PumCon1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
conserved oligomeric Golgi complex subunit 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Puma concolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PumCon1.0 Primary Assembly

Genomic

  1. NW_020339444.1 Reference PumCon1.0 Primary Assembly

    Range
    218524527..218606734 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025924609.1 → XP_025780394.1  conserved oligomeric Golgi complex subunit 6

    UniProtKB/TrEMBL
    A0A6P6HXI3
    Conserved Domains (1) summary
    pfam06419
    Location:56 → 652
    COG6; Conserved oligomeric complex COG6
Nucleotide Protein
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