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RGMB repulsive guidance molecule BMP co-receptor b [ Puma concolor (puma) ]

Gene ID: 112860554, updated on 15-Mar-2024

Summary

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Gene symbol
RGMB
Gene description
repulsive guidance molecule BMP co-receptor b
Gene type
protein coding
RefSeq status
MODEL
Organism
Puma concolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Puma
Orthologs
human mouse all
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Genomic context

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See RGMB in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current PumCon1.0 (GCF_003327715.1) Unplaced Scaffold NW_020339444.1 (80628333..80653615, complement)

NW_020339444.1Genomic Context describing neighboring genes Neighboring gene peptidyl-prolyl cis-trans isomerase A pseudogene Neighboring gene chromodomain helicase DNA binding protein 1 Neighboring gene ferritin light chain pseudogene Neighboring gene RIO kinase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020339444 Unplaced Scaffold Reference PumCon1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables coreceptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in BMP signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RGM domain family member B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Puma concolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PumCon1.0 Primary Assembly

Genomic

  1. NW_020339444.1 Reference PumCon1.0 Primary Assembly

    Range
    80628333..80653615 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025923835.1 → XP_025779620.1  RGM domain family member B

    UniProtKB/TrEMBL
    A0A6P6HUV8
    Conserved Domains (3) summary
    pfam06534
    Location:566 → 740
    RGM_C; Repulsive guidance molecule (RGM) C-terminus
    pfam06535
    Location:394 → 561
    RGM_N; Repulsive guidance molecule (RGM) N-terminus
    pfam10243
    Location:102 → 246
    MIP-T3; Microtubule-binding protein MIP-T3
Nucleotide Protein
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