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TP53 tumor protein p53 [ Puma concolor (puma) ]

Gene ID: 112856999, updated on 15-Mar-2024

Summary

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Gene symbol
TP53
Gene description
tumor protein p53
Gene type
protein coding
RefSeq status
MODEL
Organism
Puma concolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Puma
Orthologs
human mouse all
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Genomic context

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See TP53 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current PumCon1.0 (GCF_003327715.1) Unplaced Scaffold NW_020339219.1 (2253189..2258667, complement)

NW_020339219.1Genomic Context describing neighboring genes Neighboring gene sex hormone binding globulin Neighboring gene ATPase Na+/K+ transporting subunit beta 2 Neighboring gene WD repeat containing antisense to TP53 Neighboring gene ephrin B3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020339219 Unplaced Scaffold Reference PumCon1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein tetramerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: cellular tumor antigen p53

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Puma concolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PumCon1.0 Primary Assembly

Genomic

  1. NW_020339219.1 Reference PumCon1.0 Primary Assembly

    Range
    2253189..2258667 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025920288.1 → XP_025776073.1  LOW QUALITY PROTEIN: cellular tumor antigen p53

    UniProtKB/TrEMBL
    A0A6P6HL51
    Conserved Domains (3) summary
    pfam07710
    Location:311 → 350
    P53_tetramer; P53 tetramerisation motif
    pfam08563
    Location:7 → 28
    P53_TAD; P53 transactivation motif
    cl14608
    Location:87 → 281
    P53; P53 DNA-binding domain
Nucleotide Protein
Heading Accession and Version

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