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LOC112855510 heterogeneous nuclear ribonucleoprotein A1-like [ Puma concolor (puma) ]

Gene ID: 112855510, updated on 9-Nov-2023

Summary

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Gene symbol
LOC112855510
Gene description
heterogeneous nuclear ribonucleoprotein A1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Puma concolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Puma
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Genomic context

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See LOC112855510 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current PumCon1.0 (GCF_003327715.1) Unplaced Scaffold NW_020339215.1 (33483625..33500343, complement)

NW_020339215.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene S-phase cyclin A associated protein in the ER Neighboring gene U1 spliceosomal RNA Neighboring gene reticulocalbin 2 Neighboring gene proline-serine-threonine phosphatase interacting protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020339215 Unplaced Scaffold Reference PumCon1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Puma concolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PumCon1.0 Primary Assembly

Genomic

  1. NW_020339215.1 Reference PumCon1.0 Primary Assembly

    Range
    33483625..33500343 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025919159.1 → XP_025774944.1  LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like

    UniProtKB/TrEMBL
    A0A6P6HGQ6
    Conserved Domains (3) summary
    cd12580
    Location:232 → 308
    RRM2_hnRNPA1; RNA recognition motif 2 in heterogeneous nuclear ribonucleoprotein A1 (hnRNP A1) and similar proteins
    pfam16501
    Location:460 → 502
    SCAPER_N; S phase cyclin A-associated protein in the endoplasmic reticulum
    cl17169
    Location:139 → 219
    RRM_SF; RNA recognition motif (RRM) superfamily
Nucleotide Protein
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