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LOC112853229 cytochrome b-c1 complex subunit 2, mitochondrial [ Puma concolor (puma) ]

Gene ID: 112853229, updated on 15-Mar-2024

Summary

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Gene symbol
LOC112853229
Gene description
cytochrome b-c1 complex subunit 2, mitochondrial
Gene type
protein coding
RefSeq status
MODEL
Organism
Puma concolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Puma
Orthologs
human mouse all
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Genomic context

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See LOC112853229 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current PumCon1.0 (GCF_003327715.1) Unplaced Scaffold NW_020338752.1 (2598434..2628268, complement)

NW_020338752.1Genomic Context describing neighboring genes Neighboring gene modulator of smoothened Neighboring gene PDZ domain containing 9 Neighboring gene ATP-binding cassette sub-family A member 3-like Neighboring gene lysine rich coiled-coil 1 Neighboring gene non-histone chromosomal protein HMG-14 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020338752 Unplaced Scaffold Reference PumCon1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytochrome b-c1 complex subunit 2, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Puma concolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PumCon1.0 Primary Assembly

Genomic

  1. NW_020338752.1 Reference PumCon1.0 Primary Assembly

    Range
    2598434..2628268 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025916754.1 → XP_025772539.1  cytochrome b-c1 complex subunit 2, mitochondrial

    UniProtKB/TrEMBL
    A0A6P6H9X6
    Conserved Domains (1) summary
    COG0612
    Location:27 → 434
    PqqL; Predicted Zn-dependent peptidase [General function prediction only]
Nucleotide Protein
Heading Accession and Version

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