U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC112852534 cytochrome b-c1 complex subunit 1, mitochondrial [ Puma concolor (puma) ]

Gene ID: 112852534, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
LOC112852534
Gene description
cytochrome b-c1 complex subunit 1, mitochondrial
Gene type
protein coding
RefSeq status
MODEL
Organism
Puma concolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Puma
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC112852534 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current PumCon1.0 (GCF_003327715.1) Unplaced Scaffold NW_020338751.1 (16680749..16689451, complement)

NW_020338751.1Genomic Context describing neighboring genes Neighboring gene collagen type VII alpha 1 chain Neighboring gene urocortin 2 Neighboring gene transmembrane protein 89 Neighboring gene solute carrier family 26 member 6

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_020338751 Unplaced Scaffold Reference PumCon1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
cytochrome b-c1 complex subunit 1, mitochondrial

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Puma concolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PumCon1.0 Primary Assembly

Genomic

  1. NW_020338751.1 Reference PumCon1.0 Primary Assembly

    Range
    16680749..16689451 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025916038.1 → XP_025771823.1  cytochrome b-c1 complex subunit 1, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A6P6H8G0
    Conserved Domains (1) summary
    COG0612
    Location:46 → 469
    PqqL; Predicted Zn-dependent peptidase [General function prediction only]

  2. XM_025916037.1 → XP_025771822.1  cytochrome b-c1 complex subunit 1, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A6P6H840
    Conserved Domains (1) summary
    COG0612
    Location:47 → 470
    PqqL; Predicted Zn-dependent peptidase [General function prediction only]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases