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NUP133 nucleoporin 133 [ Puma concolor (puma) ]

Gene ID: 112851539, updated on 15-Mar-2024

Summary

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Gene symbol
NUP133
Gene description
nucleoporin 133
Gene type
protein coding
RefSeq status
MODEL
Organism
Puma concolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Puma
Orthologs
human mouse all
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Genomic context

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See NUP133 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
25
Annotation release Status Assembly Chr Location
100 current PumCon1.0 (GCF_003327715.1) Unplaced Scaffold NW_020338451.1 (18813598..18869288)

NW_020338451.1Genomic Context describing neighboring genes Neighboring gene TATA-box binding protein associated factor 5 like Neighboring gene ATP binding cassette subfamily B member 10 Neighboring gene centriole, cilia and spindle associated protein Neighboring gene RAB4A, member RAS oncogene family

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020338451 Unplaced Scaffold Reference PumCon1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in poly(A)+ mRNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nuclear pore outer ring IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear pore complex protein Nup133

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Puma concolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PumCon1.0 Primary Assembly

Genomic

  1. NW_020338451.1 Reference PumCon1.0 Primary Assembly

    Range
    18813598..18869288
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025915046.1 → XP_025770831.1  nuclear pore complex protein Nup133

    UniProtKB/TrEMBL
    A0A6P6H600
    Conserved Domains (1) summary
    pfam03177
    Location:544 → 1045
    Nucleoporin_C; Non-repetitive/WGA-negative nucleoporin C-terminal
Nucleotide Protein
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