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PXYLP1 2-phosphoxylose phosphatase 1 [ Puma concolor (puma) ]

Gene ID: 112850306, updated on 15-Mar-2024

Summary

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Gene symbol
PXYLP1
Gene description
2-phosphoxylose phosphatase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Puma concolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Puma
Orthologs
human mouse all
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Genomic context

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See PXYLP1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current PumCon1.0 (GCF_003327715.1) Unplaced Scaffold NW_020338336.1 (124267939..124303773, complement)

NW_020338336.1Genomic Context describing neighboring genes Neighboring gene RAS p21 protein activator 2 Neighboring gene zinc finger and BTB domain containing 38 Neighboring gene splA/ryanodine receptor domain and SOCS box containing 4 Neighboring gene solute carrier family 25 member 36

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020338336 Unplaced Scaffold Reference PumCon1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycosaminoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2-phosphoxylose phosphatase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Puma concolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PumCon1.0 Primary Assembly

Genomic

  1. NW_020338336.1 Reference PumCon1.0 Primary Assembly

    Range
    124267939..124303773 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025913955.1 → XP_025769740.1  2-phosphoxylose phosphatase 1

    UniProtKB/TrEMBL
    A0A6P6H1Y3
    Conserved Domains (1) summary
    cl11399
    Location:87 → 424
    HP; Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction
Nucleotide Protein
Heading Accession and Version

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