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PIGZ phosphatidylinositol glycan anchor biosynthesis class Z [ Puma concolor (puma) ]

Gene ID: 112849896, updated on 15-Mar-2024

Summary

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Gene symbol
PIGZ
Gene description
phosphatidylinositol glycan anchor biosynthesis class Z
Gene type
protein coding
RefSeq status
MODEL
Organism
Puma concolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Puma
Orthologs
human mouse all
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Genomic context

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See PIGZ in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current PumCon1.0 (GCF_003327715.1) Unplaced Scaffold NW_020338336.1 (73636875..73641557, complement)

NW_020338336.1Genomic Context describing neighboring genes Neighboring gene SUMO specific peptidase 5 Neighboring gene nuclear cap binding protein subunit 2 Neighboring gene NCBP2 antisense 2 (head to head) Neighboring gene melanotransferrin Neighboring gene U6 spliceosomal RNA Neighboring gene discs large MAGUK scaffold protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020338336 Unplaced Scaffold Reference PumCon1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: GPI mannosyltransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Puma concolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PumCon1.0 Primary Assembly

Genomic

  1. NW_020338336.1 Reference PumCon1.0 Primary Assembly

    Range
    73636875..73641557 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025913555.1 → XP_025769340.1  LOW QUALITY PROTEIN: GPI mannosyltransferase 4

    UniProtKB/TrEMBL
    A0A6P6H0V1
    Conserved Domains (1) summary
    cl21590
    Location:54 → 444
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
Heading Accession and Version

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