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LOC112800191 arabinosyltransferase XEG113-like [ Arachis hypogaea (peanut) ]

Gene ID: 112800191, updated on 22-Oct-2023

Summary

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Gene symbol
LOC112800191
Gene description
arabinosyltransferase XEG113-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Arachis hypogaea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis
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Genomic context

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See LOC112800191 in Genome Data Viewer
Location:
chromosome: Arahy.05
Exon count:
14
Annotation release Status Assembly Chr Location
101 current arahy.Tifrunner.gnm1.KYV3 (GCF_003086295.2) Arahy.05 NC_037622.1 (3000762..3006071)

Chromosome Arahy.05 - NC_037622.1Genomic Context describing neighboring genes Neighboring gene calvin cycle protein CP12-1, chloroplastic-like Neighboring gene abscisic acid 8'-hydroxylase CYP707A2-like Neighboring gene pentatricopeptide repeat-containing protein At4g19220, mitochondrial-like Neighboring gene F-box/kelch-repeat protein At3g23880-like Neighboring gene ABC transporter E family member 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037622.1 Chromosome Arahy.05 Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arabinosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall pectin biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
arabinosyltransferase XEG113-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arachis hypogaea Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

Genomic

  1. NC_037622.1 Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

    Range
    3000762..3006071
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025842328.2 → XP_025698113.1  arabinosyltransferase XEG113-like isoform X1

    Conserved Domains (1) summary
    pfam03407
    Location:161 → 387
    Nucleotid_trans; Nucleotide-diphospho-sugar transferase

  2. XM_025842329.2 → XP_025698114.1  arabinosyltransferase XEG113-like isoform X2

    Conserved Domains (1) summary
    pfam03407
    Location:46 → 272
    Nucleotid_trans; Nucleotide-diphospho-sugar transferase
Nucleotide Protein
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