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LOC112798074 callose synthase 3-like [ Arachis hypogaea (peanut) ]

Gene ID: 112798074, updated on 22-Oct-2023

Summary

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Gene symbol
LOC112798074
Gene description
callose synthase 3-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Arachis hypogaea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis
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Genomic context

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See LOC112798074 in Genome Data Viewer
Location:
chromosome: Arahy.04
Exon count:
43
Annotation release Status Assembly Chr Location
101 current arahy.Tifrunner.gnm1.KYV3 (GCF_003086295.2) Arahy.04 NC_037621.1 (126663516..126689950)

Chromosome Arahy.04 - NC_037621.1Genomic Context describing neighboring genes Neighboring gene importin beta-like SAD2 Neighboring gene aspartic proteinase-like protein 2 Neighboring gene uncharacterized LOC112798075 Neighboring gene uncharacterized LOC112795459

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037621.1 Chromosome Arahy.04 Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-D-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 1,3-beta-D-glucan synthase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
callose synthase 3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arachis hypogaea Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

Genomic

  1. NC_037621.1 Reference arahy.Tifrunner.gnm1.KYV3 Primary Assembly

    Range
    126663516..126689950
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025841240.1 → XP_025697025.1  callose synthase 3-like isoform X2

    Conserved Domains (3) summary
    pfam02364
    Location:1018 → 1795
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam04652
    Location:35 → 161
    Vta1; Vta1 like
    pfam14288
    Location:305 → 416
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1

  2. XM_025841241.2 → XP_025697026.1  callose synthase 3-like isoform X5

    Conserved Domains (3) summary
    pfam02364
    Location:1021 → 1283
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam04652
    Location:38 → 164
    Vta1; Vta1 like
    pfam14288
    Location:308 → 419
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1

  3. XM_025841238.2 → XP_025697023.1  callose synthase 3-like isoform X3

    Conserved Domains (3) summary
    pfam02364
    Location:1021 → 1794
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam04652
    Location:38 → 164
    Vta1; Vta1 like
    pfam14288
    Location:308 → 419
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1

  4. XM_025841234.2 → XP_025697019.1  callose synthase 3-like isoform X1

    Conserved Domains (3) summary
    pfam02364
    Location:1021 → 1798
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam04652
    Location:38 → 164
    Vta1; Vta1 like
    pfam14288
    Location:308 → 419
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1

  5. XM_025841235.2 → XP_025697020.1  callose synthase 3-like isoform X2

    Conserved Domains (3) summary
    pfam02364
    Location:1018 → 1795
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam04652
    Location:35 → 161
    Vta1; Vta1 like
    pfam14288
    Location:305 → 416
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1

  6. XM_025841236.2 → XP_025697021.1  callose synthase 3-like isoform X2

    Conserved Domains (3) summary
    pfam02364
    Location:1018 → 1795
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam04652
    Location:35 → 161
    Vta1; Vta1 like
    pfam14288
    Location:305 → 416
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1

  7. XM_025841239.2 → XP_025697024.1  callose synthase 3-like isoform X4

    Conserved Domains (3) summary
    pfam02364
    Location:1021 → 1781
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam04652
    Location:38 → 164
    Vta1; Vta1 like
    pfam14288
    Location:308 → 419
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1
Nucleotide Protein
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